Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDMLYWLLIAAVFIIAFIGLVYPVI-------------PSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAAVLFAADYVSNLLGVKRFGGSKAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQKDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL
1VRN Chain:M ((146-231))-----WNFAAAIFFVLCIGCIHPTLVGSWSEGVPFGIWPHIDWLTAFSIRYG-NFYYCPW-HGFSIGFAYGCGLLFAA-HGATILAVARFGGDR-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 97 -26168 -269.77 -358.46
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain M : 0.50

3D Compatibility (PKB) : -269.77
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.135

(partial model without unconserved sides chains):
PDB file : Tito_1VRN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VRN-query.scw
PDB file : Tito_Scwrl_1VRN.pdb: