Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVENPMVINNWHDKLTETDVQIDFYGDEVTPVDDYVIDGGEIILR-ENLERYLREQLGFEFKNAQ
5GAG Chain:W ((35-80))--EAPLAIELDHDKVMNMQAKAEFYSEVLT----IVVDGKEIKVKAQDVQRH-------------


General information:
TITO was launched using:
RESULT:

Template: 5GAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 71 -7130 -100.42 -158.43
target 2D structure prediction score : 0.24
Monomeric hydrophicity matching model chain W : 0.73

3D Compatibility (PKB) : -100.42
2D Compatibility (Sec. Struct. Predict.) : 0.24
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_5GAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAG-query.scw
PDB file : Tito_Scwrl_5GAG.pdb: