Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKKQQYVTIKGTKNGLTLHLDDACSFDELLDGLQNMLSIEQYTDGKGQKISVHVKLGNRFLYKEQEEQLTELIASKKDLFVHSIDSEVITKKEAQQIREEAEIISVSKIVRSGQVLQVKGDLLLIGDVNPGGTVRAGGNIFVLGSLKGIAHAGFNGNNQAVIAASEMLPTQLRINHVLNRSPDHIQKGNEMECAYLDTDGNMVIERLQHLAHLRPDLTRLEGGM
5AJ8 Chain:A ((182-220))-----------------------------------------------------------------------------------------------------------------------------------------CADCAIYCLPIAGSAF--LSNCTNCRVYV---ACHQLRLKGCTN---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5AJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 116 -21818 -188.09 -559.44
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -188.09
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.199

(partial model without unconserved sides chains):
PDB file : Tito_5AJ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJ8-query.scw
PDB file : Tito_Scwrl_5AJ8.pdb: