Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDTAMARLNEGTIVIYALSVLFYFIDFLQHNRKAGKMAFWLLSIVWTLQTVYLAYFMWVTGRFPVLNVTEALYFYAWVLVTLSLVLTKLLRV---DFIVFFTN-----VIGFS--MIAIHTFSPTEQQSAAFS----GQLVSELLVIHITMAILSYGAFS--LSFVFSVLYMFQYHLLKKKKWGKWLLRIEDLSKLDYMAYVLNVIGVPMLLLSLILGVIWA----YVSLETLY----------WFDAKVLGSFVVLLLYSYYLYIRLIKELQGKVAALWNTACFLVLMI-----NYFLLGSLS---QFHWFS
2W18 Chain:A ((24-356))NLQLVSELKNPSGSCSVDVSAMFWEKEPCIITACEDVVSLWKALDAWQWEKLYTWHF----AEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT-GQLLKKMH-IDDASVCHKAYSEMGLLFIVLSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDL--LLGQCTALLPPVQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS


General information:
TITO was launched using:
RESULT:

Template: 2W18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1422 -156038 -109.73 -582.23
target 2D structure prediction score : 0.12
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -109.73
2D Compatibility (Sec. Struct. Predict.) : 0.12
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.055

(partial model without unconserved sides chains):
PDB file : Tito_2W18.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W18-query.scw
PDB file : Tito_Scwrl_2W18.pdb: