Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDVQHIDHSFTIGKKGRENEVPVLKDVSLSVAKGEIACIVGRSGSGKSTLLNLISGYISPTKGRIVINGTDVTGFNEKEWAQFRLDHFGFIFQSFQLIPGLTTYENVEM-PLALKGIKPSERKQKVQDMLKRVGLENHAAHYPNELSGGQQQRVSIARALILNPSIILADEPTGSLDSETEHEVLELIQQLNRERGITFVIITHDDEVASIGHSKFQLHDGVLKGGITVEV
3C41 Chain:J ((3-197))MIDVHQLKKSF--------GSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKA-KDTNLNKVR-EEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHE--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 945 -70572 -74.68 -363.77
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain J : 0.82

3D Compatibility (PKB) : -74.68
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_3C41.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C41-query.scw
PDB file : Tito_Scwrl_3C41.pdb: