Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEDKMDLYLQQGMYGPLETKPDERHLFLGSLRERVVLALTKGQVLRSKPYKEAEHELKNSHNVTLLINGELQYQ-SYSSYIQMASRYGVPFKIVSDLQFHTPLGIVIAADIAVNRELIYIQDDIYNRSVLKS
4NUT Chain:A ((40-88))--------------------------------------------------ANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRV----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 129 -13221 -102.48 -275.43
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -102.48
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.712

(partial model without unconserved sides chains):
PDB file : Tito_4NUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NUT-query.scw
PDB file : Tito_Scwrl_4NUT.pdb: