Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFDVHKFDMKKEQDFLQVQFNLKNRINLSPTIHPDSINTCAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADLETHVLRTFYQKNHV
2W35 Chain:B ((1-221))MDYRQLHRWDLPPEEA-IKVQNELRKKIKLTP--YEGEPEYVAGVDLSF---PGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLY---GTFKMPEDKRCSWSYLYDGEEIIGCVIRTKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQRLK--------


General information:
TITO was launched using:
RESULT:

Template: 2W35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1363 -166058 -121.83 -751.39
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -121.83
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_2W35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W35-query.scw
PDB file : Tito_Scwrl_2W35.pdb: