Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIKQYSQEELKEMALVEIAHELFEEHKKPVPFQELLNEIASLLGVKKEELGDRIAQFYTDLNIDGRFLALSDQTWGLRSWYPYDQLDEETQPTVKAKKKKAKKAVEEDLDLDEFEEIDEDDLDLDEVEEELDLEADDFDEEDLDEDDDDLEIEEDIIDEDDEDYDDEEEEIK
4JPS Chain:A ((35-140))--------ECLREATLITIKHELFKEARK-YPLHQLLQDESSYIFVSVTQEAER-----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 58 -4352 -75.03 -96.70
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -75.03
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.658

(partial model without unconserved sides chains):
PDB file : Tito_4JPS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JPS-query.scw
PDB file : Tito_Scwrl_4JPS.pdb: