Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYF------SLPVLTSYFTFLNAPA-IGAVSWAW------------LFAIAQFAMTWILSTVYS--RRAAHFDKYVSALKEDLKGEQT------------
4P0T Chain:A ((20-172))TATILLVGTEDALLQQLADSMLKEDCASELKVHLAKSLPLPPRIDLIVFVVNLHSKYSLQNTEESLRHVDASFFLGKVCFLATGAGRESHCSIHRHTVVKLAHTYQSPLLYCDLEVEGFRATMAQRLVRVLQICAGHVPGVSALNLLS


General information:
TITO was launched using:
RESULT:

Template: 4P0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 387 -33901 -87.60 -332.36
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -87.60
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_4P0T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P0T-query.scw
PDB file : Tito_Scwrl_4P0T.pdb: