Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH
3CEM Chain:A ((513-545))
---AKVKQENKLKFSQFLETEYKVKINPSSMFDVQV---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CEM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5896 for 132 contacts (44.7/contact) +
2D Compatibility (PS) -3278 + (NN) 510 + (LL) 6076
1D Compatibility (HY) -4000 + (ID) 600
Total energy: 4604.0 ( 34.88 by residue)
QMean score : 0.046
(partial model without unconserved sides chains):
PDB file :
Tito_3CEM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CEM-query.scw
PDB file :
Tito_Scwrl_3CEM.pdb
: