Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEHRVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTPVPGVVVHLPIAQVGPQPAA
4XYP Chain:A ((1-70))
-----------------------------------------------VKEKLNGIIDQINKVNLLLEGEIEAVRRIAYMNQASSLQNQVEIGLIGEYLNISSWLETKTLTKTEEGLM----------------------
General information:
TITO was launched using:
RESULT:
Template:
4XYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4839 for 288 contacts (16.8/contact) +
2D Compatibility (PS) -7713 + (NN) -2444 + (LL) 3636
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -3332.0 ( -11.57 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_4XYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XYP-query.scw
PDB file :
Tito_Scwrl_4XYP.pdb
: