Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
3FAV Chain:A ((12-85))
-----------LAQEAGNFERISGDLKTQIDQVESTAGSLQ--GQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYS------------------
General information:
TITO was launched using:
RESULT:
Template:
3FAV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6852 for 378 contacts (18.1/contact) +
2D Compatibility (PS) -8166 + (NN) -1936 + (LL) 1896
1D Compatibility (HY) 800 + (ID) 600
Total energy: -1154.0 ( -3.05 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_3FAV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FAV-query.scw
PDB file :
Tito_Scwrl_3FAV.pdb
: