Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR |
2QGO Chain:A ((4-126)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNIKFTDNAVDYLKRREILDKILILITDDGGGKYS-IHFSIIWLDKVDPDYPVKIANEQNVKIYTSDFDKTMLGPNMVMDYNAGSLSLSSDEGLLDGSVDIGNGAALLKANKNVQ------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21701 for 835 contacts (-26.0/contact) +
2D Compatibility (PS) -12206 + (NN) -467 + (LL) 7128
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -31346.0 ( -37.54 by residue)
QMean score : 0.198
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