Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MTGALSQSSNISPLPLAADL------RSADNRDCPSRTDVLG---------------AALANVVGGPVGRHALIGRTRLMTPLRVMF---AIALVFLALGWSTKAACLQSTGTGPGD-----------QRVANWDNQRAYYQLCYSDTVPLYGAELLSQGKFPYKSSWI--ETDSNGTPQLRYDGQIAVRYMEYPVLTGIYQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWAT----SGLAGRRIWDAALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFLYPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSLYNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTFLTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRM--YYLYGNPSRSLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVFANAADAPPGRLPSWLRPRLGDEHARERT---PDAGRDRTFSGQHRA |
| 1S4F Chain:A ((92-674)) | VIREHNKWILKKIRFQGNLNTKKMLNPGKLSEQLDREGRKRNIYNHQIGTIMSSAGIRLEKLPIVRAQTDTKTFHEAIRDKIDKSENRQNPELHNKLLEIFHTIAQPTLKHTYGEVTWEQLEAGVNRKGAAGFLEKKNIGEVLDSEKHLVEQLVRDLKAGRKIKYYETAIPKNEKRDVSDDWQAGDLVVEKRPRVIQYPEAKTRLAITKVMYNWVKQQPVVIPG---YEGKTPLFNIFDKVRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEIQKYYYKKEWHKFIDTITDHMTEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCESTGVPYKSFNRVARIHVCGDDGFLITEKGLGLKFANKGMQILHEAGKP-----------QKITEGEKMKVAYRFEDIEFCSHTPVPVRWS---DNTSSHMAGRDTAVILSKMATRLDSSGERGTTAYEKAVAFSFLLMYSWNPLVRRICLLVLSQQPETDPSKHATYYYKGDPIGAYKDVIGRNLSELKRTGFEKLANL-----------------NLSLSTLGVWTKHTSKRIIQDCVAIGKEEGNWLV--KPDRLISSKTGHLYIPDKGFTLQGKHY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347556 for 4201 contacts (-82.7/contact) +
2D Compatibility (PS) -52805 + (NN) 5367 + (LL) 1884
1D Compatibility (HY) -1200 + (ID) 3250
Total energy: -397560.0 ( -94.63 by residue)
QMean score : 0.166
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