Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQADEIRRARETKSVRDLEHANEIKAAIEALGPIALPVKTSADSGKLFGSVTAADVVAAIKKAGGPNLDKRIVRLPKTHIKAVGTHFVSVHLHPEIDVEVSLDVVAQS
487D Chain:K ((1-148))
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKL-TVTIPAK-AGEGGRLFGSITSKQIAESLQAQHGLKLDKRKIELADA-IRALGYTNVPVKLHPEVTATLKVHVTEQ-
General information:
TITO was launched using:
RESULT:
Template:
487D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101034 for 960 contacts (-105.2/contact) +
2D Compatibility (PS) -16603 + (NN) -7602 + (LL) -104
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -137043.0 ( -142.75 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_487D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-487D-query.scw
PDB file :
Tito_Scwrl_487D.pdb
: