Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITRYKPESGFVARSGGPDRKRPHDWIVWHFTHADNLPGIITAGRLLADSAVTPTTEVAYNPVKELRRHKVVAPDSRYPASMASDHVPFYIAARSPMLYVVCKGHSGYSGGAGPLVHLGVALGDIIDADLTWCASDGNAAASYTKFSRQVDTLGTFVDFD-LLCQRQWHNTDDDPNRQSRRAAEILVYGHVP--FELVSYVCCYNTETMTRVRTLLDPVGGVRKYVIKPGMYY--- |
4YCI Chain:A ((60-256)) | -AEPPQYMIDLYNRYTTDKSSTPASNIVRSFS-------------------VEDAISTAATEDFPFQKHILI-----FNISIPR---HEQITRAELRLYVSCQNDVDSTHG----LEGSMVVYDVLEDSETWDQATG----TKTFLVSQDIRDEGWETLEVSSAVKRWVRAD---STTNKNKLEVTVQSHRESCDTLDISVPPGSKNLPFFVVFSNDRSNGTKETRLELKEMIGHE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86236 for 1346 contacts (-64.1/contact) +
2D Compatibility (PS) -20543 + (NN) -4945 + (LL) 1400
1D Compatibility (HY) 2000 + (ID) 1550
Total energy: -109874.0 ( -81.63 by residue)
QMean score : 0.196
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