Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCADAQPSGSVGLLGRNCPTATTRWRRAGEGLTAADTIEV--KLWAGKPRLHP-LVP-KRAVGVLL---AVAHGQVAKTPSATRAIAFRHVRLMRVRWICAG----NRGRKHKRRCTTQYRSTQASKLQLHFKLRQTLNRLGGLQAMVSACG
2XL4 Chain:A ((26-172))
--RPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRASEASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLD---
General information:
TITO was launched using:
RESULT:
Template:
2XL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18967 for 873 contacts (-21.7/contact) +
2D Compatibility (PS) -13734 + (NN) 3120 + (LL) 292
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -33089.0 ( -37.90 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_2XL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XL4-query.scw
PDB file :
Tito_Scwrl_2XL4.pdb
: