Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYLAGAAQIGGVMVGAPLVIGMTRQVRARWEGRAGAGL--LQPW-----------RDLLKQLGKQQITPAGTTIVFAAAPVIVAGTTLLIAA-IAPL----VATGSPLDPSADLFAVVGLLFLGTVALTLAGIDTGTSFGGMG-ASREITIAALVEPTILLAVFALSI-PAGSANLGALVAST-IDHPGHVVSLAGVLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGP--------------RLALVEWAAGMR--------LTVLLALLA-NLFLPWGIAGAAPTALDVLTGVVAVAAKVA----------ILAV------LLATFEVFLAKLRLFRV-----PELLAGSFLLALLAVTAA----------NFFTVGA---------------------- |
| 4OL8 Chain:A ((24-461)) | PVWLQQKYR-------EIIRNDLPPPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP---CSSPVVLVPKTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG------NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPS---GKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLD----DILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPITEKQDKAIDKLKDAPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLEYPAGELELLGIIKALHHFRYMLHGKHFTLRTNHARRVQRWLDDLATYDFTLEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172217 for 1856 contacts (-92.8/contact) +
2D Compatibility (PS) -30872 + (NN) -7438 + (LL) 2548
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -220829.0 ( -118.98 by residue)
QMean score : 0.118
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