Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCVIEFWDENG-GAASGEIELAALNIP |
1SC0 Chain:A ((78-136)) | -------------------------------------------------------------------------------------------------------------------KTVVGLDINANHLRPVRSGKVTARATPINLG-----RNIQVWQ--IDIRTEENKLCCVSRLTLSVI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19454 for 316 contacts (-61.6/contact) +
2D Compatibility (PS) -5996 + (NN) 781 + (LL) 9388
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -17281.0 ( -54.69 by residue)
QMean score : 0.208
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