Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDRILAAVCDVLYIDEADLIDGDETDLR-DLGLDSVRFVLLMKQL----GVNRQSELPSRLAANPSIAGWLRELEAVCTEFG
2CNR Chain:A ((10-80))
--AGLAEIVNEIAGIPVEDVK--LDKSFTDDLDVDSLSMVEVVVAAEERFDVK--IPDD-DVKNLKTVGDATKYILDH-----
General information:
TITO was launched using:
RESULT:
Template:
2CNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56584 for 465 contacts (-121.7/contact) +
2D Compatibility (PS) -6989 + (NN) -4309 + (LL) 424
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -70308.0 ( -151.20 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2CNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CNR-query.scw
PDB file :
Tito_Scwrl_2CNR.pdb
: