Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDRVKAVAPPDGRTMMTTESVARKTQKSETEAPREP---APVSDEKQTDVAKTVARLRKTFASG---RTRSVEWRKQQLRALQKLMDENEDAIAAALAEDLDRNPFEAYLADIATTSAEAKY---AAKRVRRWMRRRYLLLEVPQLPGRGWVEYEPYGTVLIIGAWNYP---FYLTLGPAVGAIAAGNAVVLKPSEIAAASAHLMTELVYRYLDTEA------IAVVQGDGAVSQELIA--QGFDRVMFTGGTEIGRKVYEGAA-PHLTPVTLELGGKSPVIVAADADVDVAAKRIAWIKLLNAGQTCVAPDYVLADATVRDELVSKITAALTKFRSGAP------QGMRIVNQRQFDRLSGYLAAAKTDAAADGGGVVVGGD-CDASNLRIQPTVVVDPDPDGPLMSNEIFGPILPVVTVKSLDDAIRFVNSRPKPLSAYLFTKSRAVRERVIREVPAGGMMVN-HLAFQVSTAKLPFGGVGASGMGAYHGRWGFEEFSHRKSVLTKPTRPDLSSFIYPPYTERAIKVARRLF |
4PXL Chain:B ((47-509)) | -------------------DAVSGKT--FETRDPRTGEVIASIAEGDKADVDLAVKAAREAFDNGPWPRMTGYE-RGRILHRFADLIDEHVEELAALDTVDAGKLFAVGKARDIPGAAHLLRYYAGAADKVHGATLKMAQRM-------HGYTLKEPVGVVGHIVPWNYPTTMFFFKVGPA---LAAGCAVVVKPAEQTPLSA-----LFYAHLAREAGVPAGVLNVVPGFGPTAGAAVAAHMDVDKVSFTGSTEVGRLVMRAAAESNLKPVSLELGGKSPVIVFDDADLDMAVNLVNFATYTNKGEICVAGTRIYVQEGIYDEFVKKAAELASKSVVGDPFNPSVSQGPQ-VDKDQYEKVLRYIDIGKREGAT----LVTGGKPCGDKGYYIEPTIFTDVKDDMTIAQDEIFGPVMALMKFKTVEEVIQKANNTRYGLAAGIVTKNIDVANTVSRSIRAGAIWINCYFAFDPDA---PFGGYKMSGFGKDMGMDALDKYLQTKTVVT--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189109 for 3830 contacts (-49.4/contact) +
2D Compatibility (PS) -47563 + (NN) -20718 + (LL) 4040
1D Compatibility (HY) -26000 + (ID) 7750
Total energy: -287100.0 ( -74.96 by residue)
QMean score : 0.494
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