Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLNDIQVWTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDP----------RVSVPVYPARVTPEGRIQVARVAV
3D89 Chain:A ((14-135))
------KYTSVCVGREEDIRKSERMTAVV-HDREVVIFYH-KGEYHAMDIRCYHSGG-PLHLGEIEDFNGQSCIVCPWHKYKITLATGEGLYQSINPKPKWCSKGVKQRIHTVKVDN-GNIYVTLSK-
General information:
TITO was launched using:
RESULT:
Template:
3D89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67053 for 773 contacts (-86.7/contact) +
2D Compatibility (PS) -11613 + (NN) -3939 + (LL) 744
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -84861.0 ( -109.78 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_3D89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D89-query.scw
PDB file :
Tito_Scwrl_3D89.pdb
: