Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEI----ARREFREPP-LSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
3DBO Chain:B ((20-150))
--PAAGVLDTSVFIA----QLDE----ALIPDRVATTVVTLAELRVGVLAAATTDIRAQRLAT-LESVADMETLPVDDDAARMWARLRIHLAESG--RRVRINDLWIAAVAASRALPVITQDDDFAALDGAASVEIIRV-------
General information:
TITO was launched using:
RESULT:
Template:
3DBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32011 for 921 contacts (-34.8/contact) +
2D Compatibility (PS) -13098 + (NN) -2873 + (LL) 860
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -51772.0 ( -56.21 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3DBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DBO-query.scw
PDB file :
Tito_Scwrl_3DBO.pdb
: