Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
2CG4 Chain:A ((4-51))
------------------YLIDNLDRGILEALMG---NARTAYAELAKQFGVSPETIHVRVEKMKQAGI---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9710 for 281 contacts (-34.6/contact) +
2D Compatibility (PS) -5344 + (NN) -1746 + (LL) 5156
1D Compatibility (HY) -800 + (ID) 250
Total energy: -12694.0 ( -45.17 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_2CG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CG4-query.scw
PDB file :
Tito_Scwrl_2CG4.pdb
: