Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYADIGGG--PLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG
1E59 Chain:A ((4-226))
-----KLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1E59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90424 for 1767 contacts (-51.2/contact) +
2D Compatibility (PS) -23940 + (NN) -12427 + (LL) 892
1D Compatibility (HY) -18800 + (ID) 5750
Total energy: -150449.0 ( -85.14 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1E59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E59-query.scw
PDB file :
Tito_Scwrl_1E59.pdb
: