Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATA-------------SRLVARLGPEAVRIIADTFAQLVTGQMRE--TRGTSE-NVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG |
| 3KRP Chain:A ((33-265)) | -----------------------------------------ESMRYSLL----AGGKRVRPMLCIAACELVGGDESTAMPAACAV-EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEG---LVAGQVVDVCSEGMAEVGLDHLEF---IHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFADRLN-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31891 for 1576 contacts (-20.2/contact) +
2D Compatibility (PS) -20627 + (NN) -5682 + (LL) 10160
1D Compatibility (HY) -17600 + (ID) 3850
Total energy: -69490.0 ( -44.09 by residue)
QMean score : 0.429
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