Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSATIPARDLRNHTAEVLRRVAAGEEIEVLKDNRPVARIVPLKRRRQWLPAAEVIGELVRLGPDTTNLGEELRETLTQTTDDVRW
3K33 Chain:D ((3-51))
---SINFRTARGNLSEVLNNVEAGEEVEITRRGREPAVIVSKATFEAYKKAA---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10815 for 267 contacts (-40.5/contact) +
2D Compatibility (PS) -5716 + (NN) -2591 + (LL) 2428
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -19094.0 ( -71.51 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3K33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K33-query.scw
PDB file :
Tito_Scwrl_3K33.pdb
: