Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
| 1NPP Chain:D ((130-245)) | ---------------------------------------------------------------------------------------------------LDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNIL---NQIKRGVKPS-----------------KVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39879 for 611 contacts (-65.3/contact) +
2D Compatibility (PS) -12217 + (NN) -780 + (LL) 8152
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -58974.0 ( -96.52 by residue)
QMean score : 0.352
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