Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIK-HAVWACPTQALSIRETGE
1ROF Chain:A ((1-59))
--MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQ----PETDLPCAKDAADSCPTGAISVE----
General information:
TITO was launched using:
RESULT:
Template:
1ROF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28907 for 421 contacts (-68.7/contact) +
2D Compatibility (PS) -5694 + (NN) -1294 + (LL) -192
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -40187.0 ( -95.46 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1ROF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ROF-query.scw
PDB file :
Tito_Scwrl_1ROF.pdb
: