Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRV-RDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIA-DWGE-AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR-FAKLYHELERGTDPLAYVDPYL---PIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM--RHRDAYAAVIDELDELYGDGRSVSF-HALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAC-VRYRRRTGV
3KHM Chain:A ((20-453))----------------GHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA------LLRLPLPQSARCREARAELQKILGEIIVAREK--------SDLLGGLLKAVYRDGT-RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPA---QLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG-------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR-DEVPDPDYHTMVVGPTLNQCLVKYTRK---


General information:
TITO was launched using:
RESULT:

Template: 3KHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -256465 for 3312 contacts (-77.4/contact) +
2D Compatibility (PS) -43458 + (NN) -18495 + (LL) 812
1D Compatibility (HY) -35600 + (ID) 7000
Total energy: -360206.0 ( -108.76 by residue)
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_3KHM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KHM-query.scw
PDB file : Tito_Scwrl_3KHM.pdb: