Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKP-GLRQAVNHLRAE-GFDVHSVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH |
3W8F Chain:A ((2-193)) | ---LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWG-RIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLV--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154126 for 1591 contacts (-96.9/contact) +
2D Compatibility (PS) -20500 + (NN) -4847 + (LL) 4696
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -187777.0 ( -118.02 by residue)
QMean score : 0.509
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