Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDAAQVIEPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTKTVLEAALQEEMTEHLGYDRHAAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFEPVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYGVSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESAKFWLAVLTDLRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTCIIHLIRNTFRYASRKYWDKISVDLKPIYTAASAAEARLRYEEFAEKWGKPYPAITRLWDSAWEEFIPFLDYDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLVTRSLDPKGTGQTKWAVRWKPALNALAITFADRMPAAEER
1PDN Chain:C ((15-59))------------------------------------------------------------------------------------------------------------------------------GRPLPNNIRLKIVEMAADGIRPCVISRQ----LR--VSHGCVSKILNRYQE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1PDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -26889 for 267 contacts (-100.7/contact) +
2D Compatibility (PS) -4489 + (NN) 1875 + (LL) 28500
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -4253.0 ( -15.93 by residue)
QMean score : 0.752

(partial model without unconserved sides chains):
PDB file : Tito_1PDN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PDN-query.scw
PDB file : Tito_Scwrl_1PDN.pdb: