Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAY--C-----VDVMKQISAVQSSLERANRVMLHNHLE--TCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
1OXZ Chain:A ((208-302))
-----MEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEIL------QANDNLTQVINLYKQLVRGEE----------------------
General information:
TITO was launched using:
RESULT:
Template:
1OXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31188 for 550 contacts (-56.7/contact) +
2D Compatibility (PS) -9248 + (NN) -6272 + (LL) 1260
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -48798.0 ( -88.72 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1OXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OXZ-query.scw
PDB file :
Tito_Scwrl_1OXZ.pdb
: