Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGDCPRSRTVRWSWDTGHVTAEPQPTPRPAKPRLLQDGRDMFWSLAPLVVGCILLAGLVGMCSFQLGGTKRGPIPSYDAAQALRADAKTLGFPIRLPQLPGGWTPNSGGRGGIENGRADPATGQRRNAATSIVGFISPTGRYLSLTQSNADEDKLVGSIHPSMYPTGTVDVGGTRWVVYEGSD--ENGAVEPVWTTRLTGPGGATQLAITGAGSIDQFRTLASATQSQPPLPAR |
3CP0 Chain:A ((38-78)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TSGQVRLDGSIWSARSMDPTHTFAEGEIVSVIDIQ----GTTAIV------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11280 for 186 contacts (-60.6/contact) +
2D Compatibility (PS) -4281 + (NN) -2488 + (LL) 6724
1D Compatibility (HY) 0 + (ID) 350
Total energy: -11675.0 ( -62.77 by residue)
QMean score : 0.193
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