Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCS--RMADEPRLEAGAHPFEEGRD-KAPELRATQMDHVR---FTEGRRERNRDRLERSQQFRQPGR
4F3F Chain:C ((6-64))
MCPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDEL--------
General information:
TITO was launched using:
RESULT:
Template:
4F3F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21623 for 314 contacts (68.9/contact) +
2D Compatibility (PS) -5384 + (NN) 5 + (LL) 380
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 14274.0 ( 45.46 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_4F3F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F3F-query.scw
PDB file :
Tito_Scwrl_4F3F.pdb
: