Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAW-----QDHAEVSVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCG-------VPYTDAL-------PEMPEPAIEVEP-PVCD---CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
4UTV Chain:A ((26-275))
--IAIITGAGVSAESGVPTFRG-PGGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMEC-------KYHFEGPCGSTLPPALE-------
General information:
TITO was launched using:
RESULT:
Template:
4UTV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111643 for 1712 contacts (-65.2/contact) +
2D Compatibility (PS) -23881 + (NN) -13389 + (LL) 932
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -171131.0 ( -99.96 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_4UTV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTV-query.scw
PDB file :
Tito_Scwrl_4UTV.pdb
: