Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDPTDLAFAGAAAQARMLADGALTAPMLLEVYLQRIERLDSHLRAYRVVQFDRARAEAEAAQQRLDAGERLPLL-GVPIAIKDDVDIAGEVTTYGSAGHGPAATSDAE--------VVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWCLNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPCTWCGLFGLKPQRDRISLEPHDGAWQ--GLSVNGPIARSVMDAALLLD----------ATTTVPGPEGEFVAAAARQPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDLGHDVVVRDPDYPAS---------------TYANYLPRFFRGISDDADAQAH-PDRLEARTRAIARLGSFFSDRRMAALRAAEVVLSSRIQSIFDDVDVVVTP------------GAATGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWNLTGQPAAVVPWDFDGDGLPMSVQLVGRPYDEATLLALAAQIESARPWAHRRPSVS |
4YJI Chain:A ((10-485)) | -------WKSAAEIVELVKSKQISPREVVESTIDLIEQRDPGLNAVVYKAYDEAREKAAALERRIMQGEPVGMLAGVPTLMKD---LFAAKPGWPSTLGGIRALKDARGAAGVWSTYPLKMSGEDSLLLGQTNSPVYGFRGTTDNTFFGPTRNPFNLDFNAGGSSGGAAALVADGIVPVAGGTDGGGAIRIPAAWTNTYGFQPSIGRVPFKSRPNAFHPGPYLYEGPITRTVRDAALAMNVLHGFDRRDPASLRV---KLDFTSALAQGVRGKKIGLTLNYGV-FPVQQEIQDL--IGKAARVFTELGAHVEFVDLGIPYSQKQMSDAWCRMIAIPTVASMQALRKEGIDLYGEHRADIPDALMKWIDAVADI----SVQQISADQLLRTTVFDCMNGVFDRFDLLLAPTLACMPVRNATDGCTEGPSQINGEEIDPLIGWCMTYLT--------NFSGHPSASVPAGLI-DGLPAGMLIIGDRQADLDVIAASAAFERASPWSQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178626 for 3843 contacts (-46.5/contact) +
2D Compatibility (PS) -46552 + (NN) -25601 + (LL) 956
1D Compatibility (HY) -22800 + (ID) 6600
Total energy: -279223.0 ( -72.66 by residue)
QMean score : 0.510
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