Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKS--VSAS-GDTLGAVISDLEANYSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
2M19 Chain:A ((1-92))
MELELRFFATFREVVGQ-KSIYWRVDDDATVGDVLRSLEAEYDGLAGRLIE-D--GEVKPHVNVLKNGREVVHLDGMATALDDGDAVSVFPPVAGG
General information:
TITO was launched using:
RESULT:
Template:
2M19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65909 for 638 contacts (-103.3/contact) +
2D Compatibility (PS) -9891 + (NN) -3877 + (LL) -188
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -89915.0 ( -140.93 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_2M19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M19-query.scw
PDB file :
Tito_Scwrl_2M19.pdb
: