Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAA--TRNGRIGVIGTRATITSHAYQDAFAAARDTEITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
3UHF Chain:A ((20-270))
FQSNAMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP--DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIV-EFLKERENID-LKNHKAKLH---FYASSDVESLKNTAKIWLN---------------
General information:
TITO was launched using:
RESULT:
Template:
3UHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196662 for 2205 contacts (-89.2/contact) +
2D Compatibility (PS) -27743 + (NN) -15031 + (LL) 1364
1D Compatibility (HY) -19200 + (ID) 4200
Total energy: -261472.0 ( -118.58 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_3UHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UHF-query.scw
PDB file :
Tito_Scwrl_3UHF.pdb
: