Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIP--NLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
1S96 Chain:A ((15-195))
-------------------QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYY--GTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTII--------
General information:
TITO was launched using:
RESULT:
Template:
1S96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107651 for 1333 contacts (-80.8/contact) +
2D Compatibility (PS) -20055 + (NN) -10697 + (LL) 92
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -155161.0 ( -116.40 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_1S96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S96-query.scw
PDB file :
Tito_Scwrl_1S96.pdb
: