Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLV--PLSAMQGNLIAHFVDR--RTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPD---YQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLL--LLL--PMPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 4Z3N Chain:A ((27-246)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLYKLLLRMALPMFVGMLTQVT-YAIADIFWLSH-----GIIAGVGLVFPVGMGLFAIANGIQIGMGSLLSRAIGMQRLDRAQRILSVGIIIALFFAIVITVLGYVYAQPLLRS-LGATKSIIGYATEFYYYSLLTVFSIMLIGVMMGLFQGAGKIMVIMKASLLGALVNIMLDPIMIFVFDFGVKGVALASFLAQLSMVAYFIYTL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136183 for 1344 contacts (-101.3/contact) +
2D Compatibility (PS) -19866 + (NN) -9183 + (LL) 19660
1D Compatibility (HY) -11600 + (ID) 950
Total energy: -158122.0 ( -117.65 by residue)
QMean score : 0.187
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