Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLDELADQLRQEHCVGVEV--LPLDLADT-QARAQLADRL-RSDAIAGLCNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALP--GMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWA------EIASAERFS-----IPLAQ-VSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR
3RI3 Chain:B ((24-254))
------QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH---TEEAFDRITARVPIGRYVQPSEVAE--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124074 for 1669 contacts (-74.3/contact) +
2D Compatibility (PS) -22837 + (NN) -17088 + (LL) 3260
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -177289.0 ( -106.22 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3RI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RI3-query.scw
PDB file :
Tito_Scwrl_3RI3.pdb
: