Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAGVTQL---------AGLARYPQPMAPAAAAEHAGMALPA-RDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARIAMVRAALPAGAASLDAGDFAAMSAAAFDRNWVAGLVG
3QXH Chain:A ((23-190))
--MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENML-DFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQL-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QXH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101240 for 1226 contacts (-82.6/contact) +
2D Compatibility (PS) -17470 + (NN) -11294 + (LL) 4428
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -136026.0 ( -110.95 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3QXH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QXH-query.scw
PDB file :
Tito_Scwrl_3QXH.pdb
: