Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLPDDRLEELLALAHEVRMRWCGP-EVEVEGIISLKTGGCPEDCHFCSQSGLFASPVRSAWL-DIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLMA---QVAAGIEAIRNEVEINIAC-SLGMLTAEQVDQLAARGVHRYNHNLETARSFFANVVTTHTWEERWQTLSMVRDAGMEVCCGGILGMGETLQQRAEFAAELAEL--GPDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLRFAGGREITLGDLGAKRGILGGINAVIVGNYLTTLGRPAE-ADLELLDELQMPLKALNASL |
| 1R30 Chain:B ((35-331)) | --------------------------------------------VTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLE-----ACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGRE-QMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154618 for 2495 contacts (-62.0/contact) +
2D Compatibility (PS) -32301 + (NN) -22935 + (LL) 4140
1D Compatibility (HY) -23600 + (ID) 5550
Total energy: -234864.0 ( -94.13 by residue)
QMean score : 0.549
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