Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELKKDPVSRR---PLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAER--KGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGL-DRVKPFRPFQLNSRLLAL-ADSDAIVLHCLPA------------------HRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
1DUV Chain:G ((6-333)) | --KHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTG-KNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160583 for 2700 contacts (-59.5/contact) +
2D Compatibility (PS) -34022 + (NN) -26047 + (LL) 244
1D Compatibility (HY) -27200 + (ID) 6100
Total energy: -253708.0 ( -93.97 by residue)
QMean score : 0.535
|
|
|