Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGRLRGGYQVEGREVTPTQLLERLGF--RRDQLSARVDDLSGGQRRRLQLMLTLLSEPNVLLLDEPTNDVDTEMLTATEDLLDSWAG---TLIVVSHDRYLLERVTDQQYAILDDRLRHLPGGIDEYLQLAARVSAPAPAERPAPPAMSGAQRRATEKELAAVDRQLARLADRVAAKHTELAEHDQSDHVGITRLTQQLRVLQDHVAAMENRWLELSEMLE |
4YMW Chain:J ((120-211)) | --------------------LLAKVGLLDKKDQYPIK---LSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGD-RVIFMDD---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34301 for 545 contacts (-62.9/contact) +
2D Compatibility (PS) -9715 + (NN) -6833 + (LL) 10168
1D Compatibility (HY) -9200 + (ID) 1600
Total energy: -51481.0 ( -94.46 by residue)
QMean score : 0.489
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