Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLRDAGPVVFMNGWYYLTRREDVLAALRNPKVFSSRKALQPPGNPLPVVPLAF------DPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGRGE-CEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMSDRPHPTEADVAAARELLE-YLTAMVAERRRNPGPDVLSQV---QIGEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPVAP-RVTTEPVTVGGMTLPAGSPVRLCMAAVNRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRFPSKSFALK---NLPLRWS
4MM0 Chain:A ((48-399))-----------------------------------------------FLVTRYEDVRFVLSDPR-FSVRQDL--PGAPR-LTEMTFESVMTTDPPVHTRLRRLLSRDFTARRIERMRPRLEEIAEGLLDEMEKKGAPADIVESLAVPFPITVICELLGVPMVDVARFRGWADTMVSLTGY---SMEDWTAARDALESYLDGLVAAKRENPGSDLLSALVATAAEDNELTDHDVRSLSLILLLAGYEPASNQLGSSVLTLLRFPDRLAELRRDPGLLPSAVEELMRYAPAGDGALFRVTLEDVTIGDTHIPANSAVLASTQAANWDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRFPRLALATDES-GLRWSSPGSMLSGFAEIPVTW-


General information:
TITO was launched using:
RESULT:

Template: 4MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200030 for 2618 contacts (-76.4/contact) +
2D Compatibility (PS) -36808 + (NN) -32358 + (LL) 1784
1D Compatibility (HY) -22000 + (ID) 6000
Total energy: -295412.0 ( -112.84 by residue)
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_4MM0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MM0-query.scw
PDB file : Tito_Scwrl_4MM0.pdb: