Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLRDAGPVVFMNGWYYLTRREDVLAALRNPKVFSSRKALQPPGNPLPVVPLAF------DPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGRGE-CEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMSDRPHPTEADVAAARELLE-YLTAMVAERRRNPGPDVLSQV---QIGEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPVAP-RVTTEPVTVGGMTLPAGSPVRLCMAAVNRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRFPSKSFALK---NLPLRWS |
4MM0 Chain:A ((48-399)) | -----------------------------------------------FLVTRYEDVRFVLSDPR-FSVRQDL--PGAPR-LTEMTFESVMTTDPPVHTRLRRLLSRDFTARRIERMRPRLEEIAEGLLDEMEKKGAPADIVESLAVPFPITVICELLGVPMVDVARFRGWADTMVSLTGY---SMEDWTAARDALESYLDGLVAAKRENPGSDLLSALVATAAEDNELTDHDVRSLSLILLLAGYEPASNQLGSSVLTLLRFPDRLAELRRDPGLLPSAVEELMRYAPAGDGALFRVTLEDVTIGDTHIPANSAVLASTQAANWDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRFPRLALATDES-GLRWSSPGSMLSGFAEIPVTW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200030 for 2618 contacts (-76.4/contact) +
2D Compatibility (PS) -36808 + (NN) -32358 + (LL) 1784
1D Compatibility (HY) -22000 + (ID) 6000
Total energy: -295412.0 ( -112.84 by residue)
QMean score : 0.567
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