Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCR-PYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQ---VAARMKVLAAPDLEVVALLSR---------GKLL-YGVIDDENQPPGSRDI--PDNEFRVVLARRGQHWVSAVRVGNDITVDDVTV-------------SDSASIAALVMDGLESIHHAD-----PAAINAVNVPME--------EMLEATKSWQE-----SGFNVFSG-----GDLRR--MGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGE--------AWLAI------CPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
| 4Q98 Chain:A ((9-365)) | --VVETNATVSFIIKSGESRAVGDDLTDAKITKLTAMVYAGQVQEGIKTVEEDGGVLKVEGIPCKSGANRVLVVVANHNYELTGKSLNEVEALTTSLTAENQNAKNLIMTGKSAAFTIKPGSNHYGYPGGTASDNLVSAGTPL-AVTRVHAGISFAGVEVNMATQYQNYYSFKPADAKIAALVAKKDSKIFGNSLVSNTNAYLYGVQTPAGLYTPDAAGETYELEASLNTNYAVGAGFYVLESKYDASNELRPTILCIYGKLLDKDGNPLTEPALTDAINAG-FCDGDGTTYYPVLVNYDGNG---YIYSGAITQGQNKIVRNNHYKISLNITGPGTNTPENPQPVQANLNVTCQVTP---WVVVNQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46011 for 2024 contacts (-22.7/contact) +
2D Compatibility (PS) -29825 + (NN) 2695 + (LL) 792
1D Compatibility (HY) -5200 + (ID) 3500
Total energy: -81049.0 ( -40.04 by residue)
QMean score : 0.188
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