Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTRPREIYLATAVSIGILLSLIAPLGPPLARADGT-SQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
4OJ7 Chain:F ((14-171))
------------------------------------DTALTNLVALASQRLALAEPVAHWKWINRKPISDPPREAALLTDVEKRATANGVDPAYARTFFDDQIAASKQLQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSIANWKTLTRYDSAQKDALGTALSHVC------
General information:
TITO was launched using:
RESULT:
Template:
4OJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39435 for 1144 contacts (-34.5/contact) +
2D Compatibility (PS) -17094 + (NN) -10498 + (LL) 2916
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -74461.0 ( -65.09 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_4OJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OJ7-query.scw
PDB file :
Tito_Scwrl_4OJ7.pdb
: