Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLSRTSTGRVILVPTQLRFDRWFLPLAVPLGLGPKNSELWVGAGSLHVKMGWAFAADIP-LTSITKAEATNARVYAAGVHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
1JIF Chain:A ((4-74))
------------------------------------------------------FLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSA----WIEVTDPDAL-------
General information:
TITO was launched using:
RESULT:
Template:
1JIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3408 for 418 contacts (-8.2/contact) +
2D Compatibility (PS) -7496 + (NN) -32 + (LL) 4888
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -10748.0 ( -25.71 by residue)
QMean score : -0.059
(partial model without unconserved sides chains):
PDB file :
Tito_1JIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JIF-query.scw
PDB file :
Tito_Scwrl_1JIF.pdb
: